ukbiobank-omop-etl

Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversion

View the Project on GitHub thehyve/ukbiobank-omop-etl

Table name: procedure_occurrence

Reading from stem_table

Destination Field Source field Logic Comment field
procedure_occurrence_id id    
person_id person_id    
procedure_concept_id concept_id    
procedure_date start_date    
procedure_datetime start_datetime    
procedure_type_concept_id type_concept_id    
modifier_concept_id modifier_concept_id    
quantity quantity    
provider_id provider_id    
visit_occurrence_id visit_occurrence_id    
visit_detail_id      
procedure_source_value source_value    
procedure_source_concept_id source_concept_id    
modifier_source_value modifier_source_value