ukbiobank-omop-etl

Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversion

View the Project on GitHub thehyve/ukbiobank-omop-etl

Table name: death

Reading from ukb8256.csv

Destination Field Source field Logic Comment field
person_id eid    
death_date 40000-0.0   Date of death
death_datetime 40000-0.0   Date of death
death_type_concept_id 40020-0.0   Death record origin
cause_concept_id 40001-0.0   Underlying (primary) cause of death: ICD10
cause_source_value 40001-0.0   Underlying (primary) cause of death: ICD10
cause_source_concept_id 40001-0.0   Underlying (primary) cause of death: ICD10